Training materials
Related resources: Assembly dataset or COBRA Toolbox or Epigenetics dataset or User Interface and Features dataset or seq-seq-pan
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Pan genomics tutorial using Minima2 and seq-seq-pan
• beginnerpan genomics genome alignment Minimap2 alignment seq-seq-pan R visualization genome alignment -
Tutorial
Constraint-based reconstruction and analysis toolbox tutorials
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Tutorial
User Interface and Features - Jupyter: Use Jupyter notebooks in Galaxy
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Tutorial
Assembly - Making sense of a newly assembled genome
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Tutorial
Epigenetics - Hi-C analysis of Drosophila melanogaster cells using HiCExplorer
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Tutorial
Assembly - Unicycler Assembly
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Tutorial
Assembly - De Bruijn Graph Assembly
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Tutorial
Assembly - Introduction to Genome Assembly
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Tutorial
Epigenetics - DNA Methylation data analysis