Training materials
Related resources: ARROWSMITH or Genome Annotation slides or Input datasets or Introduction to Galaxy dataset or Introduction to the EGA and sharing sensitive data or RCN Open data policy or Variant Analysis dataset
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Video, Presentation
Introduction to the EGA and its Ecosystem of Tools
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Slides
Data Management Planning workshop for new Life Science Projects
• beginnerData management Deposition Data handling Data retrieval data management plan NeLS TSD metadata sensitive data publication data protection storage identifiers DMP licensing Compliance data life cycle - collect data life cycle - reuse data life cycle - analyse data life cycle - process data life cycle - preserve data life cycle - share data life cycle - plan -
Tutorial
Statistics - Interval-Wise Testing for omics data
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Tutorial
Assembly - Making sense of a newly assembled genome
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Tutorial
Genome Annotation - Genome annotation with Prokka
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Tutorial
Genome Annotation - Genome Annotation
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Tutorial
Variant Analysis - Mapping and molecular identification of phenotype-causing mutations
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Tutorial
Variant Analysis - Microbial Variant Calling
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Tutorial
Epigenetics - Hi-C analysis of Drosophila melanogaster cells using HiCExplorer
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Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining