Training materials
Scientific topics: Genetic variation or Machine learning or Protein interactions or Sample collections
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Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
hands-on tutorial
Hands-on for 'Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data' tutorial
•• intermediatevariant-analysis covid19 virology one-health -
hands-on tutorial
Hands-on for 'M. tuberculosis Variant Analysis' tutorial
•• intermediatevariant-analysis prokaryote one-health -
slides
Introduction to 'Variant Analysis'
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Training materials
Machine Learning & BioStatistics Hackathon 2020
• beginnerMachine learning Statistics and probability Computer science machine learning biostatistics eLearning EeLP -
WEBINAR: Getting started with deep learning
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WORKSHOP: Variant calling in humans, animals and plants with Galaxy
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Computer Software, workflow
How to use V-pipe (SARS-CoV-2 data)
• beginnerVirology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling -
Tutorial
How to install and load the Identifier Mapping Service with data needed for gene-to-variant and variant-to-gene
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STRING exercises
• beginnerBioinformatics Molecular interactions, pathways and networks Protein interactions