Training materials
Scientific topics: Chemical biology or Data acquisition or Gene expression and microarray or Structural biology or Workflows
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Carpentries style curriculum
Introduction to Workflows with Common Workflow Language
• beginnerWorkflows RNA-Seq analysis cwl commonwl sciworkflows workflows -
Tutorial
Tutorial on developing Building Blocks
•• intermediateBioinformatics Workflows Personalised medicine HPC building blocks -
Presentation
Practicalities of data handling
• beginnerData security Data acquisition Data management Data handling data encryption data protection setup checksums Data transfer Data storage data organisation -
Presentation, course materials
Introduction to Nextflow workshop
• beginnerWorkflows Nextflow DSL2 -
Computer Software, workflow
How to use V-pipe (SARS-CoV-2 data)
• beginnerVirology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling -
Installation instructions, Manual
How to use Common Workflow Language
• beginnerWorkflows commonwl common workflow language CWL eLearning EeLP -
PhenoMeNal: accessing metabolomics workflows in Galaxy
• beginnerMetabolomics Chemical biology Galaxy