Training materials
Difficulty level: Intermediate
and Keywords: Assembly or Europe PMC or Knowledge graph or Python or ansible or assembly or computer-science
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Online material, online course
Workshop on Resources for Plant Sciences, 2023
•• intermediatePlant biology service bundle eLearning EeLP plant science Data Visualization Gene Ontology Knowledge graph MIAPPE -
e-learning
Explore and Visualize Your Data with Python
•• intermediateData visualisation Bioinformatics Python Data analysis -
Byte-sized RSE Session 3: Testing your Python code
•• intermediateRSE Research software Python coding skills testing -
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
hands-on tutorial
Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads
•• intermediateSequence assembly Assembly covid19 -
hands-on tutorial
VGP assembly pipeline: Step by Step
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio -
hands-on tutorial
VGP assembly pipeline - short version
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
SQL with Python
•• intermediateSoftware engineering Foundations of Data Science Python SQL jupyter-notebook -
slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly
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