Training materials
Difficulty level: Beginner
and Keywords: Data management plan or FAIR data or Reproducibility or computer-science or health-informatics or transcriptomics
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Using ASAP for Single-Cell Analysis
• beginnergenes and genomes biomarkers experimental biology functional genomics next generation sequencing population genomics single-cell biology training transcriptomics bart deplancke group -
lessons
AKKI andmehalduse seminar
• beginnerData management Data management plan -
Video
ELIXIR-CONVERGE - The why of research data management
• beginnerData management FAIR data Data submission, annotation, and curation Data security Data integration and warehousing Data Life Cycle Data Steward Data Data access management Data management plan Data managment plan Data handling ELIXIR-CONVERGE -
lessons, e-learning
Introduction to Data Management Practices - Data Management Plans
• beginnerData management FAIR data Open science CONVERGE Data Stewardship Wizard Data management plan -
Submitting, Finding and Downloading Raw Sequencing Data with ENA
• beginnerFAIR data Metadata Data submission -
e-learning
Cellosaurus : A resource on cell lines
• beginnerBiosciences Experimental design and studies basic research Reproducibility cell line -
Introduction to bulk RNA-Seq: From Quality Control to Pathway Analysis
• beginnerfunctional genomics genes and genomes next generation sequencing transcriptomics training -
Gene Expression made Useful Easily: Tools and Database of Bgee
• beginnerBgee genes and genomes evolution and phylogeny services and resources comparative genomics database curation data management data visualisation transcriptomics training marc robinson-rechavi group -
Online material, hands-on tutorial
Introduction to Docker and Singularity
• beginnerReproducibility Container Singularity -
hands-on tutorial
Hands-on for 'Reference-based RNA-Seq data analysis' tutorial
• beginnertranscriptomics bulk rna-seq collections drosophila QC cyoa