Training materials
Difficulty level: Beginner
and Contributors: Emily Angiolini or James Chong or Jyoti Khadake or Laura Portell Silva or Melanie Föll or Praveen Kumar or Prof. Tom Freeman or Raniere Silva or University of York
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course materials, Online material, Training materials
Cloud-SPAN Genomics
• beginnerBioinformatics Software engineering Genomics DNA polymorphism Workflows Data architecture, analysis and design Shell Command line Cloud computing HPC Data analysis High performance computing -
youtube video, video
Data Management Planning tips
• beginnerData management FAIR data ELIXIR-CONVERGE DMP data management plan research data management FAIR principles DMP tools DMP templates tool template DMP evaluation RDMkit Data Stewardship Wizard DSW Spanish español -
youtube video, video
ELIXIR resources and Data Management Plans tools: RDMkit and Data Stewardship Wizard
• beginnerData management FAIR data ELIXIR-CONVERGE ELIXIR DMP data management plan research data management FAIR principles DMP tools DMP templates tool template DMP evaluation RDMkit Data Stewardship Wizard DSW -
course materials, online course, Training materials
Cloud-SPAN Prenomics
• beginnerBioinformatics Software engineering Genomics Query and retrieval Data handling Cloud computing Shell Command line Amazon Web Services genomics HPC Data analysis bioinformatics -
hands-on tutorial
MaxQuant and MSstats for the analysis of TMT data
• beginnerProteomics DDA TMT -
hands-on tutorial
Label-free data analysis using MaxQuant
• beginnerProteomics DDA label-free -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data (short)' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
Mass spectrometry imaging: Loading and exploring MSI data
• beginnerProteomics imaging mouse -
hands-on tutorial
Mass spectrometry imaging: Examining the spatial distribution of analytes
• beginnerMetabolomics
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