hands-on tutorial
Mass spectrometry imaging: Loading and exploring MSI data
The questions this addresses are:
- Did the tryptic digestions work?
- Is there an intensity gradient in the data?
- How good is the m/z accuracy?
The objectives are:
- How to upload an imzML file into Galaxy
- Getting an overview of the MSI data with the MSI quality control tool
- How to export MSI data as tabular files
Licence: Creative Commons Attribution 4.0 International
Keywords: Proteomics, imaging, mouse
Target audience: Students
Resource type: hands-on tutorial
Version: 17
Status: Active
Prerequisites:
Introduction to Galaxy Analyses
Learning objectives:
How to upload an imzML file into Galaxy
- Getting an overview of the MSI data with the MSI quality control tool
- How to export MSI data as tabular files
Date modified: 2023-11-09
Date published: 2018-11-27
Contributors: Björn Grüning, Melanie Föll
Scientific topics: Proteomics
Activity log