Training materials
Scientific topics: Open science or Software engineering
and Contributors: Dr. Roland Schwarz or Manimozhiyan Arumugam or Michael Krone or Mr. Andy Yates or Prof. Richard Baldock or Prof. Tom Freeman or The Carpentries or Yvonne Kallberg
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lessons, e-learning
Introduction to Data Management Practices - Versioning of data and code using Git
• beginnerData management FAIR data Software engineering RStudio CONVERGE README -
lessons, e-learning
Introduction to Data Management Practices - Cleaning tabular data with OpenRefine
• beginnerData management Open science FAIR data FAIR CONVERGE -
lessons, e-learning
Introduction to Data Management Practices - Open Science and FAIR
• beginnerData management Open science FAIR data FAIR CONVERGE -
hands-on tutorial
Variant Calling Workflow
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
Hands-on for 'SQL with R' tutorial
•• intermediatedata-science SQL R jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Hands-on for 'SQL with Python' tutorial
•• intermediatedata-science SQL Python jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Flow Control' tutorial
• beginnerdata-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Loops' tutorial
• beginnerdata-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Basic Types & Type Conversion' tutorial
• beginnerdata-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Advanced CLI in Galaxy' tutorial
•• intermediatedata-science bash jupyter-notebook
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