Training materials
Scientific topics: Biology or Transcriptomics
and Target audience: Biomedical researchers or Students
and Contributors: Cyril Monjeaud or Erwan Corre or Maria Doyle or Matthias Fahrner or Thomas Denecker
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hands-on tutorial
Visualization of RNA-Seq results with Volcano Plot
• beginnerTranscriptomics -
hands-on tutorial
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
hands-on tutorial
Visualization of RNA-Seq results with Volcano Plot in R
•• intermediateTranscriptomics interactive-tools -
hands-on tutorial
3: RNA-seq genes to pathways
• beginnerTranscriptomics mouse -
hands-on tutorial
GO Enrichment Analysis
• beginnerTranscriptomics -
hands-on tutorial
2: RNA-seq counts to genes
• beginnerTranscriptomics QC limma-voom mouse -
hands-on tutorial
1: RNA-Seq reads to counts
• beginnerTranscriptomics QC collections mouse -
hands-on tutorial
Visualization of RNA-Seq results with heatmap2
• beginnerTranscriptomics -
Slides
FAIR data - Module 4 (share and publish data)
• beginnerBioinformatics Biology Data management data sharing Data publishing legal framework data warehouse licensing data reuse