Training materials
Contributors: Clair Castle or Dr. Simon Li or Jure Dimec or Mateusz Kuzak or Matthias Fahrner or Mattias Strömberg or Melanie Föll or Nicola Soranzo or Patricia Palagi or Pavankumar Videm or Prof. Tom Freeman
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lessons, e-learning
Introduction to Data Management Practices - Versioning of data and code using Git
• beginnerData management FAIR data Software engineering RStudio CONVERGE README -
lessons, e-learning
Introduction to Data Management Practices - Introduction to RStudio
• beginnerData management FAIR data RStudio CONVERGE README -
lessons, e-learning
Introduction to Data Management Practices - Scripted analysis with R
• beginnerData management FAIR data Bioinformatics Data visualisation RStudio CONVERGE ggPlot -
lessons, e-learning
Introduction to Data Management Practices - Cleaning tabular data with OpenRefine
• beginnerData management Open science FAIR data FAIR CONVERGE -
lessons, e-learning
Introduction to Data Management Practices - Metadata
• beginnerData management FAIR data data organisation FAIR CONVERGE ontologies metadata Controlled vocabularies -
lessons, e-learning
Introduction to Data Management Practices - Data organisation practices
• beginnerData management FAIR data data organisation FAIR CONVERGE -
lessons, e-learning
Introduction to Data Management Practices - Open Science and FAIR
• beginnerData management Open science FAIR data FAIR CONVERGE -
hands-on tutorial
Hands-on for 'Pre-processing of 10X Single-Cell ATAC-seq Datasets' tutorial
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hands-on tutorial
Hands-on for 'Calling variants in diploid systems' tutorial
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hands-on tutorial
Hands-on for 'RNA-RNA interactome data analysis' tutorial