Training materials
Target audience: Students
and Contributors: Christopher Barnett or Dr. Stephen David Laycock or Eija Korpelainen or Emily Angiolini or Fidel Ramirez or Marek Vrbacky or Martin Krzywinski or Niclas Jareborg or Prof. Tom Freeman or Stéphanie Robin
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hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
hands-on tutorial
Genome annotation with Funannotate
•• intermediateGenome Annotation eukaryote gmod jbrowse1 -
hands-on tutorial
Hi-C analysis of Drosophila melanogaster cells using HiCExplorer
• beginnerEpigenomics Epigenetics -
hands-on tutorial
Formation of the Super-Structures on the Inactive X
• beginnerEpigenomics ChIP-seq Epigenetics -
hands-on tutorial
Identification of the binding sites of the Estrogen receptor
• beginnerEpigenomics ChIP-seq Epigenetics work-in-progress -
hands-on tutorial
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio -
hands-on tutorial
Galaxy Basics for everyone
• beginnerIntroduction to Galaxy Analyses -
hands-on tutorial
Analysis of molecular dynamics simulations
•• intermediateComputational chemistry
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