Training materials
Difficulty level: Beginner
and Contributors: Celia van Gelder or Christophe Klopp or Célia Michotey or Emma Leith or Kaivan Kamali or Maria Doyle or Pedro Fernandes
-
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
ATAC-Seq data analysis
• beginnerEpigenomics Epigenetics -
hands-on tutorial
Visualization of RNA-Seq results with Volcano Plot
• beginnerTranscriptomics -
hands-on tutorial
3: RNA-seq genes to pathways
• beginnerTranscriptomics mouse -
hands-on tutorial
GO Enrichment Analysis
• beginnerTranscriptomics -
hands-on tutorial
2: RNA-seq counts to genes
• beginnerTranscriptomics QC limma-voom mouse -
hands-on tutorial
1: RNA-Seq reads to counts
• beginnerTranscriptomics QC collections mouse -
hands-on tutorial
Visualization of RNA-Seq results with heatmap2
• beginnerTranscriptomics -
hands-on tutorial
Image classification in Galaxy with fruit 360 dataset
• beginnerStatistics and probability Statistics and machine learning -
hands-on tutorial
EncyclopeDIA
• beginnerProteomics DIA