Training materials
Scientific topics: Transcriptome
and Contributors: Carolyn Hogg or Celia van Gelder or Gildas Le Corguillé or Helena Rasche or Mark Beaumont or Pavankumar Videm or carpentries-incubator
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hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
carpentries-incubator/scrna-seq-analysis
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carpentries-incubator/bioc-rnaseq
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hands-on tutorial
RNA-RNA interactome data analysis
• beginnerTranscriptomics -
hands-on tutorial
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
hands-on tutorial
Hands-on for 'Analysis of plant scRNA-Seq Data with Scanpy' tutorial
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hands-on tutorial
Small Non-coding RNA Clustering using BlockClust
• beginnerTranscriptomics -
hands-on tutorial
Hands-on for 'Reference-based RNA-Seq data analysis' tutorial
• beginnertranscriptomics bulk rna-seq collections drosophila QC cyoa