Training materials
Contributors: CRUK CI Bioinformatics Core or Lounès Chikhi or Mateo Boudet or Mikko Rautiainen or Ray Sajulga or Stephan Nylinder
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hands-on tutorial
Hands-on for 'RNA-Seq analysis with AskOmics Interactive Tool' tutorial
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hands-on tutorial
Hands-on for 'Proteogenomics 1: Database Creation' tutorial
•• intermediateproteomics proteogenomics -
hands-on tutorial
Hands-on for 'Proteogenomics 2: Database Search' tutorial
•• intermediateproteomics proteogenomics -
hands-on tutorial
Hands-on for 'Proteogenomics 3: Novel peptide analysis' tutorial
•• intermediateproteomics proteogenomics -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data (short)' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
slides
Slides for 'Refining Genome Annotations with Apollo' tutorial
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slides
Slides for 'Integrate and query local datasets and distant RDF data with AskOmics using Semantic Web technologies' tutorial
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Documentation, Exercise, Handout, Scripts
CPANG19 - Computational PANGenomics (2019)
•• intermediateGenomics -
Documentation, Exercise, Handout, Scripts
PGDH19 - Population Genetics Demographic History: model-based approaches (2019)
•• intermediatePopulation Genomics Phylogenetics