Training materials
Scientific topics: Computational chemistry or Discovery proteomics or Natural language processing
and Contributors: Björn Grüning or Celia van Gelder or Erik Hjerde or Felix Almonte or Gautam Vallabha or JuliaAcademy or Manimozhiyan Arumugam or Marek Suchanek or Marek Vrbacky or Ms. Yo Yehudi or Nate Coraor or Nils Peder Willassen
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hands-on tutorial
Secretome Prediction
•• intermediateProteomics human work-in-progress -
hands-on tutorial
Label-free versus Labelled - How to Choose Your Quantitation Method
• beginnerProteomics DDA -
hands-on tutorial
Peptide and Protein Quantification via Stable Isotope Labelling (SIL)
••• advancedProteomics DDA SILAC -
hands-on tutorial
Peptide and Protein ID using SearchGUI and PeptideShaker
• beginnerProteomics DDA HeLa -
hands-on tutorial
Detection and quantitation of N-termini (degradomics) via N-TAILS
•• intermediateProteomics -
hands-on tutorial
Peptide and Protein ID using OpenMS tools
••• advancedProteomics DDA HeLa -
hands-on tutorial
Protein FASTA Database Handling
• beginnerProteomics DDA -
hands-on tutorial
Mass spectrometry imaging: Loading and exploring MSI data
• beginnerProteomics imaging mouse -
hands-on tutorial
High Throughput Molecular Dynamics and Analysis
••• advancedComputational chemistry -
course materials, Training materials, Slides
Galaxy Proteomics workshop Prague 2018
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