Training materials
Scientific topics: Proteomics
and Contributors: Björn Grüning or Celia van Gelder or Dr. Konstantinos Sidiropoulos or Dr. Martin Graham or Gary Saunders or Janick Mathys or Manimozhiyan Arumugam or Marek Vrbacky or Ms. Yo Yehudi or Nils Peder Willassen or PickyBinders or Ray Sajulga
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PickyBinders/geometric-learning-protein-structures-course
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hands-on tutorial
Label-free versus Labelled - How to Choose Your Quantitation Method
• beginnerProteomics DDA -
hands-on tutorial
Secretome Prediction
•• intermediateProteomics human work-in-progress -
hands-on tutorial
Proteogenomics 1: Database Creation
•• intermediateProteomics proteogenomics -
hands-on tutorial
Proteogenomics 2: Database Search
•• intermediateProteomics proteogenomics -
hands-on tutorial
Peptide and Protein Quantification via Stable Isotope Labelling (SIL)
••• advancedProteomics DDA SILAC -
hands-on tutorial
Peptide and Protein ID using SearchGUI and PeptideShaker
• beginnerProteomics DDA HeLa -
hands-on tutorial
Proteogenomics 3: Novel peptide analysis
•• intermediateProteomics proteogenomics -
hands-on tutorial
Detection and quantitation of N-termini (degradomics) via N-TAILS
•• intermediateProteomics -
hands-on tutorial
Peptide and Protein ID using OpenMS tools
••• advancedProteomics DDA HeLa
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