Training materials
Target audience: Biochemists or Biomedical researchers or PhD candidates or Students or geneticists or postgrad
and Contributors: Beatriz Serrano-Solano or Mateo Boudet
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hands-on tutorial
Refining Genome Annotations with Apollo (prokaryotes)
•• intermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
RNA-Seq analysis with AskOmics Interactive Tool
• beginnerTranscriptomics -
hands-on tutorial
Hands-on for 'Whole transcriptome analysis of Arabidopsis thaliana' tutorial
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hands-on tutorial
Analysis of plant scRNA-Seq Data with Scanpy
• beginnerTranscriptomics Single Cell paper-replication plants -
hands-on tutorial
Object tracking using CellProfiler
• beginnerImaging -
hands-on tutorial
Nucleoli segmentation and feature extraction using CellProfiler
• beginnerImaging -
slides
Refining Genome Annotations with Apollo
• beginnerGenome Annotation prokaryote -
slides
Integrate and query local datasets and distant RDF data with AskOmics using Semantic Web technologies
• beginnerTranscriptomics -
slides
Nucleoli Segmentation <br> & <br> Feature Extraction <br> using CellProfiler
• beginnerImaging