Training materials
Contributors: Bazante Sanders or Daniel Blankenberg or Dr. Konstantinos Sidiropoulos or Dr. Sean I O’Donoghue or Erwan Corre or Michael Krone or Prof. Tom Freeman or Vicky Schneider
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hands-on tutorial
Teaching Python
• beginnerContributing to the Galaxy Training Material -
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis' tutorial
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hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Genome Assembly of MRSA using Oxford Nanopore MinION Data' tutorial
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hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateassembly pacbio -
hands-on tutorial
Hands-on for 'Genome Assembly of MRSA using Illumina MiSeq Data' tutorial
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hands-on tutorial
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
hands-on tutorial
Hands-on for 'Pre-processing of 10X Single-Cell RNA Datasets' tutorial