Training materials
Keywords: Proteomics
and Contributors: Bazante Sanders or Björn Grüning or Celia van Gelder or Dr. Alexander Lex or Fotis E. Psomopoulos or Jessica Lindvall or Manimozhiyan Arumugam or Marek Vrbacky or Melanie Föll or Praveen Kumar or UC Davis Bioinformatics Core Training Page
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hands-on tutorial
metaQuantome 3: Taxonomy
•• intermediateProteomics Proteogenomics Metatranscriptomics Microbial ecology Metagenomics Taxonomy microgalaxy -
hands-on tutorial
MaxQuant and MSstats for the analysis of TMT data
• beginnerProteomics DDA TMT -
hands-on tutorial
Secretome Prediction
•• intermediateProteomics human work-in-progress -
hands-on tutorial
Label-free versus Labelled - How to Choose Your Quantitation Method
• beginnerProteomics DDA -
hands-on tutorial
Proteogenomics 1: Database Creation
•• intermediateProteomics proteogenomics -
hands-on tutorial
Proteogenomics 2: Database Search
•• intermediateProteomics proteogenomics -
hands-on tutorial
Peptide and Protein Quantification via Stable Isotope Labelling (SIL)
••• advancedProteomics DDA SILAC -
hands-on tutorial
metaQuantome 2: Function
•• intermediateProteomics Proteogenomics Metatranscriptomics Microbial ecology Metagenomics microgalaxy -
hands-on tutorial
Peptide and Protein ID using SearchGUI and PeptideShaker
• beginnerProteomics DDA HeLa -
hands-on tutorial
Library Generation for DIA Analysis
•• intermediateProteomics DIA
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