Training materials
Target audience: Students
and Contributors: Avans Hogeschool or Christopher Barnett or Clair Castle or Emily Angiolini or Hans-Rudolf Hotz or Jamie Edwards or Maria Doyle or Prof. Maya Topf or Prof. Tom Freeman
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hands-on tutorial
Hands-on for 'CRISPR screen analysis' tutorial
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hands-on tutorial
ATAC-Seq data analysis
• beginnerEpigenomics Epigenetics -
hands-on tutorial
Visualization of RNA-Seq results with Volcano Plot
• beginnerTranscriptomics -
hands-on tutorial
Visualization of RNA-Seq results with Volcano Plot in R
•• intermediateTranscriptomics interactive-tools -
hands-on tutorial
Pre-processing of 10X Single-Cell RNA Datasets
• beginnerTranscriptomics 10x Single Cell -
hands-on tutorial
3: RNA-seq genes to pathways
• beginnerTranscriptomics mouse -
hands-on tutorial
Clustering 3K PBMCs with Scanpy
• beginnerTranscriptomics 10x Single Cell -
hands-on tutorial
GO Enrichment Analysis
• beginnerTranscriptomics -
hands-on tutorial
2: RNA-seq counts to genes
• beginnerTranscriptomics QC limma-voom mouse -
hands-on tutorial
1: RNA-Seq reads to counts
• beginnerTranscriptomics QC collections mouse