Training materials
Target audience: Students
and Contributors: Anup Kumar or Barbara Kozlikova or Biocore@CRG or Janick Mathys or Martin Čech or Nicola Soranzo or Pavankumar Videm
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hands-on tutorial
Hands-on for 'Pre-processing of 10X Single-Cell ATAC-seq Datasets' tutorial
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hands-on tutorial
Calling variants in diploid systems
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
RNA-RNA interactome data analysis
• beginnerTranscriptomics -
hands-on tutorial
Hands-on for 'Whole transcriptome analysis of Arabidopsis thaliana' tutorial
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hands-on tutorial
Hands-on for 'Analysis of plant scRNA-Seq Data with Scanpy' tutorial
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hands-on tutorial
Single-cell quality control with scater
• beginnerTranscriptomics Single Cell -
hands-on tutorial
Small Non-coding RNA Clustering using BlockClust
• beginnerTranscriptomics -
hands-on tutorial
Hands-on for 'Reference-based RNA-Seq data analysis' tutorial
• beginnertranscriptomics bulk rna-seq collections drosophila QC cyoa -
hands-on tutorial
Hands-on for 'A Docker-based interactive Jupyterlab powered by GPU for artificial intelligence in Galaxy' tutorial
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hands-on tutorial
Regression in Machine Learning
• beginnerStatistics and probability Statistics and machine learning