Training materials
Contributors: Anne Pajon or Björn Grüning or Derek Wright or Dr. Stephen David Laycock or Jan Slifka or Martin Čech or Michael Krone or Oliver Davis or PhD BSc FSB or Pratik Jagtap or Yvonne Kallberg
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hands-on tutorial
Single-cell ATAC-seq standard processing with SnapATAC2
•• intermediate10x Single Cell epigenetics single-cell -
hands-on tutorial
Pathway analysis with the MINERVA Platform
•• intermediateTranscriptomics bulk cyoa rna-seq viz -
hands-on tutorial
Clinical Metaproteomics 3: Verification
• beginnerProteomics label-TMT11 -
hands-on tutorial
Clinical Metaproteomics 5: Data Interpretation
• beginnerProteomics label-TMT11 -
hands-on tutorial
Clinical Metaproteomics 4: Quantitation
• beginnerProteomics label-TMT11 -
hands-on tutorial
Clinical Metaproteiomics 1: Database-Generation
• beginnerProteomics label-TMT11 -
hands-on tutorial
Clinical Metaproteomics 2: Discovery
• beginnerProteomics label-TMT11 -
lessons, e-learning
Introduction to Data Management Practices - Versioning of data and code using Git
• beginnerData management FAIR data Software engineering RStudio CONVERGE README -
lessons, e-learning
Introduction to Data Management Practices - Introduction to RStudio
• beginnerData management FAIR data RStudio CONVERGE README -
lessons, e-learning
Introduction to Data Management Practices - Scripted analysis with R
• beginnerData management FAIR data Bioinformatics Data visualisation RStudio CONVERGE ggPlot