Training materials
Contributors: Anika Erxleben or Avans Hogeschool or Dave Clements or Eva Freyhult or Jason Williams or Jure Dimec or Laura Leroi or Prof. Tom Freeman
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hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Exome sequencing data analysis for diagnosing a genetic disease
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
hands-on tutorial
Genome annotation with Funannotate
•• intermediateGenome Annotation eukaryote gmod jbrowse1 -
hands-on tutorial
Formation of the Super-Structures on the Inactive X
• beginnerEpigenomics ChIP-seq Epigenetics -
hands-on tutorial
Identification of the binding sites of the Estrogen receptor
• beginnerEpigenomics ChIP-seq Epigenetics work-in-progress -
hands-on tutorial
Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)
• beginnerEpigenomics ChIP-seq Epigenetics -
hands-on tutorial
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio -
hands-on tutorial
Pre-processing of Single-Cell RNA Data
• beginnerTranscriptomics Single Cell