Training materials
Scientific topics: Proteomics
and Contributors: Andrea Argentini or Björn Grüning or Dr. Roland Schwarz or Elin Kronander or Emily Angiolini or Espen Aberg or Gary Saunders or Gautam Vallabha or Gildas Le Corguillé or Jamie Edwards or John "Scooter" Morris or Martin Krzywinski or Mateusz Kuzak or Patricia Palagi or Prof. Tom Freeman or posit-conf-2023
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hands-on tutorial
Secretome Prediction
•• intermediateProteomics human work-in-progress -
hands-on tutorial
Label-free versus Labelled - How to Choose Your Quantitation Method
• beginnerProteomics DDA -
hands-on tutorial
Peptide and Protein Quantification via Stable Isotope Labelling (SIL)
••• advancedProteomics DDA SILAC -
hands-on tutorial
Peptide and Protein ID using SearchGUI and PeptideShaker
• beginnerProteomics DDA HeLa -
hands-on tutorial
Detection and quantitation of N-termini (degradomics) via N-TAILS
•• intermediateProteomics -
hands-on tutorial
Peptide and Protein ID using OpenMS tools
••• advancedProteomics DDA HeLa -
hands-on tutorial
Protein FASTA Database Handling
• beginnerProteomics DDA -
hands-on tutorial
Mass spectrometry imaging: Loading and exploring MSI data
• beginnerProteomics imaging mouse -
course materials, Training materials, Slides
Galaxy Proteomics workshop Prague 2018
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Cytoscape stringApp exercises
•• intermediateBioinformatics Molecular interactions, pathways and networks Protein interactions Proteomics Data visualisation