Training materials
Difficulty level: Beginner
and Contributors: Anatole Chessel or Björn Grüning or Erik van Nimwegen or Frederick Carver or Jan Slifka or Jordi Rambla or Martin Strauch or Mihaela Martis or Oliver Davis or PhD BSc FSB or SIB Swiss Institute of Bioinformatics
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e-learning
ISMARA: A tool to infer genome-wide regulatory interactions
• beginnerSystems biology Gene regulation Transcription factors and regulatory sites Computational modelling -
hands-on tutorial
Hands-on for 'Label-free versus Labelled - How to Choose Your Quantitation Method' tutorial
• beginnerProteomics proteomics DDA -
hands-on tutorial
Hands-on for 'Peptide and Protein ID using SearchGUI and PeptideShaker' tutorial
• beginnerProteomics proteomics DDA HeLa -
hands-on tutorial
Hands-on for 'Protein FASTA Database Handling' tutorial
• beginnerProteomics proteomics DDA -
hands-on tutorial
Hands-on for 'Mass spectrometry imaging: Loading and exploring MSI data' tutorial
• beginnerProteomics proteomics mouse imaging -
hands-on tutorial
Hands-on for 'Galaxy 101' tutorial
• beginnerintroduction -
hands-on tutorial
Hands-on for 'From peaks to genes' tutorial
• beginnerintroduction -
Video, Manual, Slides, Installation instructions
How to install and deploy Beacon
• beginnerGenomics genomics open access eLearning EeLP -
Jupyter notebook, PDF
Introductory image processing on biological images using python.
• beginner