Training materials
Difficulty level: Intermediate
and Contributors: Anatole Chessel or Anna Swan or Anne Pajon or Anthony Bretaudeau or Björn Grüning or Celia van Gelder or Dr. Simon Li or Jamie Edwards or Manimozhiyan Arumugam or Marek Vrbacky
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hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
hands-on tutorial
Hands-on for 'Refining Genome Annotations with Apollo (eukaryotes)' tutorial
•• intermediategenome-annotation eukaryote cyoa -
hands-on tutorial
Hands-on for 'Genome annotation with Maker (short)' tutorial
•• intermediategenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Refining Genome Annotations with Apollo (prokaryotes)' tutorial
•• intermediategenome-annotation prokaryote -
hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateassembly pacbio -
hands-on tutorial
Hands-on for 'Secretome Prediction' tutorial
•• intermediateproteomics human -
hands-on tutorial
Detection and quantitation of N-termini (degradomics) via N-TAILS
•• intermediateProteomics -
slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly -
slides
Introduction to 'Genome Annotation'
•• intermediate -
Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining