Training materials
Contributors: Alvaro Gonzalez or Armando Arredondo or Dr. Alexander Lex or Eija Korpelainen or Laura Leroi
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ekorpela/cloud-vm-workshop
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hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateassembly pacbio -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
slides
Quality Control
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Video
A common framework for designing portable federated pipelines
•• intermediateData architecture, analysis and design data access federated data analysis -
Documentation, Exercise, Handout, Scripts
PGDH19 - Population Genetics Demographic History: model-based approaches (2019)
•• intermediatePopulation Genomics Phylogenetics -
Slides, course materials
Introduction to using cloud and containers for training - OpenStack and Docker oriented view
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