Training materials
Scientific topics: Sequence assembly or Software engineering
and Contributors: Allegra Via or Dr. Alexander Lex or Erwan Corre or Niclas Jareborg or The Carpentries
-
lessons, e-learning
Introduction to Data Management Practices - Versioning of data and code using Git
• beginnerData management FAIR data Software engineering RStudio CONVERGE README -
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateassembly pacbio -
hands-on tutorial
Hands-on for 'SQL with R' tutorial
•• intermediatedata-science SQL R jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Hands-on for 'SQL with Python' tutorial
•• intermediatedata-science SQL Python jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Flow Control' tutorial
• beginnerdata-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Loops' tutorial
• beginnerdata-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Basic Types & Type Conversion' tutorial
• beginnerdata-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Advanced CLI in Galaxy' tutorial
•• intermediatedata-science bash jupyter-notebook
- 1
- 2