Training materials
Difficulty level: Intermediate
and Contributors: Alexandre Cormier or Björn Grüning or Celia van Gelder or Dr. Manuel Corpas or Guy Naamati or James Johnson or Jamie Edwards or Jordi Rambla or Manimozhiyan Arumugam or Marek Vrbacky or Marius van den Beek or Melanie Föll or Nils Peder Willassen
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hands-on tutorial
Pathway analysis with the MINERVA Platform
•• intermediateTranscriptomics bulk cyoa rna-seq viz -
Online material, online course
Workshop on Resources for Plant Sciences, 2023
•• intermediatePlant biology service bundle eLearning EeLP plant science Data Visualization Gene Ontology Knowledge graph MIAPPE -
hands-on tutorial
Python - Type annotations
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
hands-on tutorial
Genome annotation with Funannotate
•• intermediateGenome Annotation eukaryote gmod jbrowse1 -
hands-on tutorial
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio -
hands-on tutorial
Secretome Prediction
•• intermediateProteomics human work-in-progress -
hands-on tutorial
Proteogenomics 1: Database Creation
•• intermediateProteomics proteogenomics -
hands-on tutorial
Proteogenomics 2: Database Search
•• intermediateProteomics proteogenomics -
hands-on tutorial
Library Generation for DIA Analysis
•• intermediateProteomics DIA
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