Training materials
Include archived: true
and Contributors: Alexandre Cormier or Beatriz Serrano-Solano or Dr. A.J. Pretorius or Eija Korpelainen or Michael Ball or Ms. Yo Yehudi or Sonika Tyagi or Vicky Schneider
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ekorpela/cloud-vm-workshop
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hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
hands-on tutorial
Genome annotation with Funannotate
•• intermediateGenome Annotation eukaryote gmod jbrowse1 -
hands-on tutorial
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio -
hands-on tutorial
Hands-on for 'Whole transcriptome analysis of Arabidopsis thaliana' tutorial
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hands-on tutorial
Analysis of plant scRNA-Seq Data with Scanpy
• beginnerTranscriptomics Single Cell paper-replication plants -
hands-on tutorial
Object tracking using CellProfiler
• beginnerImaging -
hands-on tutorial
Nucleoli segmentation and feature extraction using CellProfiler
• beginnerImaging
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