Training materials
Contributors: Alexandre Cormier or Andrea Argentini or Jan Slifka or Jure Dimec or Lucille Delisle or Marius van den Beek or Mateusz Kuzak or Matthias Fahrner or Michael Ball or Patricia Palagi or Prof. Tom Freeman
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hands-on tutorial
Hands-on for 'Use Apptainer containers for running Galaxy jobs' tutorial
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hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateSequence assembly assembly quality control -
slides
Slides for 'Genome assembly quality control.' tutorial
• beginnerSequence assembly assembly -
hands-on tutorial
Hands-on for 'From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis' tutorial
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hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'ATAC-Seq data analysis' tutorial
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hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateSequence assembly assembly pacbio -
hands-on tutorial
Hands-on for 'Creating a new tutorial' tutorial
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hands-on tutorial
Hands-on for 'Reference-based RNA-Seq data analysis' tutorial
• beginnerTranscriptomics transcriptomics bulk rna-seq collections drosophila QC cyoa -
hands-on tutorial
Hands-on for 'MaxQuant and MSstats for the analysis of TMT data' tutorial