Training materials
Difficulty level: Intermediate
and Licence: Creative Commons Attribution 4.0 International
and Contributors: Alex Mitchell or Anthony Bretaudeau or Daniel Faria or Galo A. Goig or Mark Beaumont or Mehmet Tekman or Stéphanie Robin
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hands-on tutorial
Long non-coding RNAs (lncRNAs) annotation with FEELnc
•• intermediateGenome Annotation eukaryote -
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
hands-on tutorial
Refining Genome Annotations with Apollo (eukaryotes)
•• intermediateGenome Annotation apollo2 cyoa eukaryote gmod jbrowse1 -
hands-on tutorial
Refining Genome Annotations with Apollo (prokaryotes)
•• intermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Genome annotation with Maker (short)
•• intermediateGenome Annotation eukaryote gmod jbrowse1 maker -
hands-on tutorial
Genome annotation with Funannotate
•• intermediateGenome Annotation eukaryote gmod jbrowse1 -
hands-on tutorial
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio -
slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly -
slides
An introduction to scRNA-seq data analysis
•• intermediateTranscriptomics Single Cell -
slides
Introduction to 'Genome Annotation'
•• intermediate
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