Training materials
Difficulty level: Intermediate
and Contributors: Alex Mahmoud or Anton Nekrutenko or Bilal Shaikh or Cristóbal Gallardo or David Bouyssié or Lennart Martens or Nadia Goué or Praveen Kumar
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hands-on tutorial
VGP assembly pipeline: Step by Step
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
VGP assembly pipeline - short version
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
metaQuantome 3: Taxonomy
•• intermediateProteomics Proteogenomics Metatranscriptomics Microbial ecology Metagenomics Taxonomy microgalaxy -
hands-on tutorial
Proteogenomics 1: Database Creation
•• intermediateProteomics proteogenomics -
hands-on tutorial
Proteogenomics 2: Database Search
•• intermediateProteomics proteogenomics -
hands-on tutorial
metaQuantome 2: Function
•• intermediateProteomics Proteogenomics Metatranscriptomics Microbial ecology Metagenomics microgalaxy -
hands-on tutorial
Proteogenomics 3: Novel peptide analysis
•• intermediateProteomics proteogenomics -
hands-on tutorial
Galaxy Installation on Kubernetes
•• intermediateGalaxy Server administration kubernetes -
hands-on tutorial
Managing Galaxy on Kubernetes
•• intermediateGalaxy Server administration kubernetes -
hands-on tutorial
Using dataset collections
•• intermediateUsing Galaxy and Managing your Data collections
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