Training materials
Contributors: John Sundh or Barbara Kozlikova or Eija Korpelainen or Eivind Coward or Pavankumar Videm
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ekorpela/cloud-vm-workshop
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hands-on tutorial
Hands-on for 'Pre-processing of 10X Single-Cell ATAC-seq Datasets' tutorial
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hands-on tutorial
Hands-on for 'RNA-RNA interactome data analysis' tutorial
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hands-on tutorial
Hands-on for 'Whole transcriptome analysis of Arabidopsis thaliana' tutorial
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hands-on tutorial
Hands-on for 'Analysis of plant scRNA-Seq Data with Scanpy' tutorial
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hands-on tutorial
Hands-on for 'Small Non-coding RNA Clustering using BlockClust' tutorial
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hands-on tutorial
Hands-on for 'Reference-based RNA-Seq data analysis' tutorial
• beginnertranscriptomics bulk rna-seq collections drosophila QC cyoa -
Slides
Data Management Planning workshop for new Life Science Projects
• beginnerData management Deposition Data handling Data retrieval data management plan NeLS TSD metadata sensitive data publication data protection storage identifiers DMP licensing Compliance data life cycle - collect data life cycle - reuse data life cycle - analyse data life cycle - process data life cycle - preserve data life cycle - share data life cycle - plan -
Training materials
NBIS Reproducible research course
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Slides, course materials
Introduction to using cloud and containers for training - OpenStack and Docker oriented view
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