Training materials
Content provider: CSC - IT Center for Science or Galaxy Training
and Contributors: Belinda Phipson or Emma Leith or Joan Hérisson or Subina Mehta or Torsten Seemann or Wolfgang Maier
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hands-on tutorial
Hands-on for 'Avian influenza viral strain analysis from gene segment sequencing data' tutorial
•• intermediatevariant-analysis virology -
hands-on tutorial
Hands-on for 'Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data' tutorial
•• intermediatevariant-analysis covid19 virology one-health -
hands-on tutorial
Hands-on for 'Trio Analysis using Synthetic Datasets from RD-Connect GPAP' tutorial
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hands-on tutorial
Hands-on for 'Microbial Variant Calling' tutorial
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hands-on tutorial
Hands-on for 'Genome annotation with Prokka' tutorial
• beginnergenome-annotation prokaryote -
hands-on tutorial
Hands-on for 'Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads' tutorial
•• intermediateassembly covid19 -
hands-on tutorial
Hands-on for '3: RNA-seq genes to pathways' tutorial
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hands-on tutorial
Hands-on for '2: RNA-seq counts to genes' tutorial
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hands-on tutorial
Hands-on for '1: RNA-Seq reads to counts' tutorial
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hands-on tutorial
Hands-on for 'metaQuantome 3: Taxonomy' tutorial
•• intermediateproteomics microbiome