Training materials
Content provider: CINECA PROJECT or VIB Training
and Keywords: Annotation or Cloud computing or Data analysis or federated data analysis
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hands-on tutorial
Bulk RNASeq analysis
•• intermediateTranscriptomics Gene expression Differential gene expression profiling Expression analysis Data analysis NGS RNASeq transcriptomics -
Series of videos
CINECA discovery service catalog
•• intermediateCohort data Standards federated data analysis Beacon queries -
Video
A common framework for designing portable federated pipelines
•• intermediateData architecture, analysis and design data access federated data analysis -
Video
Data Gravity in the Life Sciences: Lessons learned from the HCA and other federated data projects
•• intermediateData architecture, analysis and design Cloud computing Data analysis Standards Translational research -
Presentation
Reproducible data analysis with RStudio, github and Rmarkdown
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Video
Annotating data using ontologies
• beginnerData management Data integration and warehousing Ontology and terminology Ontologies Annotation Data integration -
Video
Solutions for overcoming cohort data integration challenges using ontology: an introduction
• beginnerOntology and terminology Data integration and warehousing Data management Ontologies Data integration Annotation -
Video
Data harmonization and enrichment using EMBL-EBI ontology tools
• beginnerData management Data submission, annotation, and curation Ontology and terminology CINECA data harmonization Annotation Ontologies