Training materials
Authors: Martin Hansen or malloryfreeberg or tseemann
and Related resources: Galaxy Server administration slides or HoloFood Project or Input datasets or Workshop FAIR & Data stewardship for the 2020 I...
-
Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
Tutorial
Genome Annotation - Genome annotation with Prokka
-
Tutorial
Variant Analysis - Microbial Variant Calling
-
Tutorial
ChIP-Seq data analysis - Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)
-
Tutorial
Transcriptomics - Reference-based RNA-Seq data analysis
-
Tutorial
Transcriptomics - Differential abundance testing of small RNAs
-
Tutorial
Transcriptomics - De novo transcriptome reconstruction with RNA-Seq