Training materials
Keywords: SED-ML or biomodel or dev
and Authors: Fotis E. Psomopoulos or Jonathan Karr or Nicola Soranzo or erasche
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hands-on tutorial
Hands-on for 'Scripting Galaxy using the API and BioBlend' tutorial
• beginnerdev jupyter-notebook -
slides
Slides for 'Scripting Galaxy using the API and BioBlend' tutorial
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slides
Slides for 'Tool Dependencies and Conda' tutorial
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slides
Slides for 'Tool development and integration into Galaxy' tutorial
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Tutorial, Documentation
runBioSimulations tutorial and help
• beginnerSystems biology Computational biology Simulation experiment Modelling and simulation biosimulators COMBINE OMEX SED-ML Modeling dynamic simulations SBML BNGL -
Tutorial, Documentation
BioSimulators tutorial and help
•• intermediateSystems biology Computational biology Simulation experiment Modelling and simulation Modeling biomodel dynamic simulations COMBINE OMEX SED-ML SBML BNGL -
Documentation
BioSimulations tutorial and help
•• intermediateComputational biology Systems biology Simulation experiment Visualisation Modelling and simulation SystemsBiology ComputationalBiology Computational modelling Modeling Biomodelling Model Kinetic modeling SED-ML COMBINE