Training materials
Content provider: CSC - IT Center for Science or Galaxy Training or NanoCommons or Swiss Institute of Bioinformatics
and Authors: Erwan Corre or erxleben or malloryfreeberg
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hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateassembly pacbio -
hands-on tutorial
Hands-on for 'De novo transcriptome assembly, annotation, and differential expression analysis' tutorial
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slides
Quality Control
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Tutorial
Genome Annotation - Genome Annotation
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Tutorial
ChIP-Seq data analysis - Identification of the binding sites of the Estrogen receptor
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Tutorial
Variant Analysis - Exome sequencing data analysis
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Tutorial
ChIP-Seq data analysis - Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)
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Tutorial
Transcriptomics - Reference-based RNA-Seq data analysis
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