Training materials
Authors: Erwan Corre or Jared Simpson or Jessica Kirkpatrick krkptrc2@illinois.edu or Mathieu Bourgey or Stéphanie Robin or bebatut
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hands-on tutorial
Long non-coding RNAs (lncRNAs) annotation with FEELnc
•• intermediateGenome Annotation eukaryote -
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
hands-on tutorial
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio -
hands-on tutorial
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
slides
Quality Control
• beginnerSequence analysis -
Tutorial
Transcriptomics - CLIP-Seq data analysis from pre-processing to motif detection
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Bioinformatics of Genomic Medicine 2018 Module 2-Introduction to Tools, Computing Infrastructure, and Data