Training materials
Authors: Egon Willighagen or Erasmus+ Programme or Janick Mathys or Jonathan Karr
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examples, Tutorial, Jupyter notebook, API reference
DE-Sim examples, tutorials, and documentation
••• advancedSimulation experiment Computer science Mathematics Computational biology Modelling and simulation Visualisation data-driven modeling Computational modelling discrete-event simulation DES object-oriented programming Python data visualization Data Science -
Documentation
BioSimulations tutorial and help
•• intermediateComputational biology Systems biology Simulation experiment Visualisation Modelling and simulation SystemsBiology ComputationalBiology Computational modelling Modeling Biomodelling Model Kinetic modeling SED-ML COMBINE -
Tutorial
Datanator tutorial
• beginnerMolecular biology Cell biology Systems biology Bioinformatics Omics Query and retrieval Filtering genomics Proteomics transcriptomics Metabolomics reaction kinetics Kinetic modeling meta analysis -
BridgeDbR Tutorial
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Tutorial
OpenRiskNet: Ontology Walkthrough and Workshop
• beginnerToxicology Ontology and terminology -
Tutorial
Adding ontology terms
••• advancedenanomapper ontologies -
Book
Groovy Cheminformatics with the Chemistry Development Kit
• beginnerCheminformatics Chemistry -
How to use the statistics module of ArrayAnalysis.org for statistics analysis of microarray data
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Tutorial
Adding nanomaterial data
•• intermediateToxicology Database management ontologies enanomapper RDF -
Tutorial
How to install and load the Identifier Mapping Service with data needed for gene-to-variant and variant-to-gene