Training materials
Difficulty level: Beginner or Not specified
and Authors: Beatriz Serrano-Solano or Boris Steipe or CRUK CI Bioinformatics Core or Maria Doyle or erasche
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hands-on tutorial
1: RNA-Seq reads to counts
• beginnerTranscriptomics QC collections mouse -
hands-on tutorial
Visualization of RNA-Seq results with heatmap2
• beginnerTranscriptomics -
hands-on tutorial
Reference-based RNA-Seq data analysis
• beginnerTranscriptomics QC bulk collections cyoa drosophila rna-seq -
hands-on tutorial
Object tracking using CellProfiler
• beginnerImaging -
hands-on tutorial
Nucleoli segmentation and feature extraction using CellProfiler
• beginnerImaging -
slides
Introduction to CRISPR screen analysis
• beginnerGenome Annotation -
slides
Nucleoli Segmentation <br> & <br> Feature Extraction <br> using CellProfiler
• beginnerImaging -
slides
Getting data into Galaxy
• beginnerUsing Galaxy and Managing your Data -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
Tutorial
A Tidy Transcriptomics introduction to RNA-Seq analyses
• beginnerRNA-Seq Differential Expression Gene Expression RNA-seq Transcriptomics