Training materials
Resource type: Tutorial
and Authors: Bartosz Bartmanski or Maria Doyle or Patricia Palagi or malloryfreeberg or rstudio::conf(2022)
-
Tutorial
Tutorial on CARNIVAL
•• intermediateMolecular interactions, pathways and networks Gene expression Omics RNA-Seq Network analysis RNA-Seq analysis HPC Signaling RNAseq, transcriptomics -
Tutorial
Tutorial on CellNOpt
•• intermediatePersonalised medicine Simulation experiment Molecular interactions, pathways and networks Transcription factors and regulatory sites Modelling and simulation HPC Biomodelling Signalling -
Tutorial
A Tidy Transcriptomics introduction to RNA-Seq analyses
• beginnerRNA-Seq Differential Expression Gene Expression RNA-seq Transcriptomics -
Tutorial
ChIP-Seq data analysis - Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)
-
Tutorial
Transcriptomics - Reference-based RNA-Seq data analysis
-
Tutorial
Transcriptomics - Differential abundance testing of small RNAs
-
Tutorial
Transcriptomics - De novo transcriptome reconstruction with RNA-Seq