Training materials
Difficulty level: Advanced or Intermediate
and Authors: Baker Matthew or Jonathan Karr or Michelle Brazas or Simon Andrews
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Best Practices in Programming
•• intermediateprogramming reproducibility bernd rinn group -
Tutorial, Documentation
BioSimulators tutorial and help
•• intermediateSystems biology Computational biology Simulation experiment Modelling and simulation Modeling biomodel dynamic simulations COMBINE OMEX SED-ML SBML BNGL -
examples, Tutorial, Jupyter notebook, API reference
DE-Sim examples, tutorials, and documentation
••• advancedSimulation experiment Computer science Mathematics Computational biology Modelling and simulation Visualisation data-driven modeling Computational modelling discrete-event simulation DES object-oriented programming Python data visualization Data Science -
Documentation
BioSimulations tutorial and help
•• intermediateComputational biology Systems biology Simulation experiment Visualisation Modelling and simulation SystemsBiology ComputationalBiology Computational modelling Modeling Biomodelling Model Kinetic modeling SED-ML COMBINE -
Analysing bisulfite methylation sequencing data
•• intermediateDNA methylation -
RNA-Seq Analysis
•• intermediateRNA-Seq -
Plotting complex figures with R
•• intermediateGraph plotting R Programming Babraham Institute -
Advanced R
••• advancedR programming Babraham Institute