Training materials
Scientific topics: Comparative transcriptomics or Sequence analysis
and Authors: Bérénice Batut or Mehmet Tekman or Vasilis Lenis or yvanlebras
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slides
Introduction to Transcriptomics
• beginnerTranscriptomics -
hands-on tutorial
Hands-on for 'Trajectory Analysis using Python (Jupyter Notebook) in Galaxy' tutorial
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hands-on tutorial
Hands-on for 'Pre-processing of 10X Single-Cell RNA Datasets' tutorial
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hands-on tutorial
CLIP-Seq data analysis from pre-processing to motif detection
• beginnerTranscriptomics -
hands-on tutorial
Pre-processing of Single-Cell RNA Data
• beginnerTranscriptomics Single Cell -
hands-on tutorial
Hands-on for 'Analysis of plant scRNA-Seq Data with Scanpy' tutorial
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hands-on tutorial
Hands-on for 'Clustering 3K PBMCs with Scanpy' tutorial
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hands-on tutorial
Downstream Single-cell RNA analysis with RaceID
• beginnerTranscriptomics Single Cell -
hands-on tutorial
Hands-on for 'Bulk RNA Deconvolution with MuSiC' tutorial
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hands-on tutorial
Hands-on for 'Reference-based RNA-Seq data analysis' tutorial
• beginnertranscriptomics bulk rna-seq collections drosophila QC cyoa
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