Training materials
Keywords: Development in Galaxy or drosophila or one-health
and Authors: Bérénice Batut or Janick Mathys or Malachi Griffith or Sorana Morrissy
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hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
Creation of an interactive Galaxy tools table for your community
• beginnerSoftware engineering Community Development in Galaxy SIG -
hands-on tutorial
Adding and updating best practice metadata for Galaxy tools using the bio.tools registry
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
•• intermediateGenetic variation Variant Analysis covid19 one-health virology -
hands-on tutorial
Data source integration
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Reference-based RNA-Seq data analysis
• beginnerTranscriptomics QC bulk collections cyoa drosophila rna-seq -
slides
Tool Shed: sharing Galaxy tools
• beginnerSoftware engineering Development in Galaxy -
slides
Galaxy Interactive Tours
• beginnerSoftware engineering Development in Galaxy -
slides
Tool development and integration into Galaxy
• beginnerSoftware engineering Development in Galaxy