Training materials
Authors: Arthur Goldberg or Grégoire Rossier or Louise Bowler or Patricia Herterich or Personalized Health Informatics Group or erxleben
and Resource type: Tutorial or e-learning
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e-learning
High Performance Computing in Life Sciences
•• intermediateComputational biology High performance computing Data storage -
Video, Training materials with mock data, e-learning
Querying Data with SPARQL
• beginnerComputer science Data management FAIR data Medical informatics Data mining Query and retrieval Database search Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph SNOMED CT LOINC Interoperability -
examples, Tutorial, Jupyter notebook, API reference
DE-Sim examples, tutorials, and documentation
••• advancedSimulation experiment Computer science Mathematics Computational biology Modelling and simulation Visualisation data-driven modeling Computational modelling discrete-event simulation DES object-oriented programming Python data visualization Data Science -
Tutorial
Genome Annotation - Genome Annotation
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Tutorial
ChIP-Seq data analysis - Identification of the binding sites of the Estrogen receptor
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Tutorial
Variant Analysis - Exome sequencing data analysis
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Tutorial
ChIP-Seq data analysis - Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)
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Tutorial
Transcriptomics - Reference-based RNA-Seq data analysis