Training materials
Difficulty level: Beginner
and Authors: Anu Mikkonen or Bruno Gaeta or Erik Hedman or Lars Juhl Jensen or Martin Morgan or Nicolas Delhomme @delhomme or Obi Griffith or Yo Yehudi or blankclemens
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lessons, e-learning
Introduction to Data Management Practices - Versioning of data and code using Git
• beginnerData management FAIR data Software engineering RStudio CONVERGE README -
lessons, e-learning
Introduction to Data Management Practices - Introduction to RStudio
• beginnerData management FAIR data RStudio CONVERGE README -
lessons, e-learning
Introduction to Data Management Practices - Scripted analysis with R
• beginnerData management FAIR data Bioinformatics Data visualisation RStudio CONVERGE ggPlot -
Tutorial
InterMine user tutorial
• beginnerData querying Data analysis Data download FAIR -
Documentation
InterMine user manual
• beginnerData querying data visualization Data download FAIR -
course materials, Video
Community analysis of amplicon sequencing data (16S rRNA)
• beginner -
Video, course materials
Metagenomics data analysis
• beginnerMetagenomics -
STRING exercises
• beginnerBioinformatics Molecular interactions, pathways and networks Protein interactions