Training materials
Difficulty level: Intermediate
and Authors: Anton Nekrutenko or Bruno Gaeta or David Wishart or Marta Lloret Llinares or Martin Morgan or Obi Griffith or Timothy J. Griffin or Yo Yehudi or blankclemens or pajanne
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Learning pathway
Version control with Git
•• intermediateSoftware engineering Open science Version control -
hands-on tutorial
Hands-on for 'metaQuantome 3: Taxonomy' tutorial
•• intermediateproteomics microbiome -
hands-on tutorial
Hands-on for 'Proteogenomics 1: Database Creation' tutorial
•• intermediateproteomics proteogenomics -
hands-on tutorial
Hands-on for 'Proteogenomics 2: Database Search' tutorial
•• intermediateproteomics proteogenomics -
hands-on tutorial
Hands-on for 'metaQuantome 2: Function' tutorial
•• intermediateproteomics microbiome -
hands-on tutorial
Hands-on for 'metaQuantome 1: Data creation' tutorial
•• intermediateproteomics microbiome -
hands-on tutorial
Hands-on for 'Proteogenomics 3: Novel peptide analysis' tutorial
•• intermediateproteomics proteogenomics -
hands-on tutorial
Hands-on for 'Using dataset collections' tutorial
•• intermediategalaxy-interface collections -
slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly -
Video
Data Gravity in the Life Sciences: Lessons learned from the HCA and other federated data projects
•• intermediateData architecture, analysis and design Cloud computing Data analysis Standards Translational research
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